Data and software accompanying Bind-n-Seq protocol

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Monday November 23, 2009

Dataset accompanying Bind-n-Seq publication

Data files

run1_seq.fa.gz - raw sequence; Solexa sequencing, run 1
run2_seq.fa.gz - raw sequence; Solexa sequencing, run 2
barCode-condition_run1.txt - conditions - barCode correspondence; run 1
barCode-condition_run2.txt - conditions - barCode correspondence; run 1

Perl scripts

htsAnalisis.pl - quality control analysis of raw sequence data
motifMapper.pl - known motif search within sequence data
seqMapper.pl - known sequences (k-mers) affinity (enrichment) calculation

Please email us using the link on the right if you have any questions about this data.

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This page last modified Monday July 20, 2009